PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.1G095700.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 173aa    MW: 17481.8 Da    PI: 8.083
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.1G095700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.42.4e-113678446
                        XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
                         +r++r+ +NRe+ArrsR RK+  ++ L+  ++ L  eN   +
  Sevir.1G095700.1.p 36 QRRAKRMLSNRESARRSRMRKQRHLDDLTAQAAHLRRENAHVA 78
                        689************************************8765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-143397IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.5533577IPR004827Basic-leucine zipper domain
PfamPF001701.5E-93678IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.6E-937109No hitNo description
SuperFamilySSF579591.97E-103784No hitNo description
CDDcd147021.89E-143886No hitNo description
PROSITE patternPS0003604055IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009744Biological Processresponse to sucrose
GO:0080149Biological Processsucrose induced translational repression
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MASSSGSGSS GSLSAATAAL AAAAGTGEEL RALMEQRRAK RMLSNRESAR RSRMRKQRHL  60
DDLTAQAAHL RRENAHVATA LGLTAQGLLA VDAENAVLRT QAAELAARLA SLNDIIACMN  120
TNAAAAAGAV AVSLTAAAAA AASASSDAYL AFDGAAAIDD LLRSCPEMFP LC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14956RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00470DAPTransfer from AT4G34590Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0673561e-161BT067356.2 Zea mays full-length cDNA clone ZM_BFc0022C11 mRNA, complete cds.
GenBankBT0853011e-161BT085301.2 Zea mays full-length cDNA clone ZM_BFb0368K21 mRNA, complete cds.
GenBankBT0853531e-161BT085353.2 Zea mays full-length cDNA clone ZM_BFc0002B07 mRNA, complete cds.
GenBankHQ8587961e-161HQ858796.1 Zea mays clone UT1860 bZIP transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004951988.11e-114PREDICTED: ocs element-binding factor 1-like
TrEMBLC5XTV62e-72C5XTV6_SORBI; Putative uncharacterized protein Sb04g002700
STRINGSb04g002700.15e-72(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.13e-28G-box binding factor 6